Welcome to CRF's Only.
The megabomb is an excellent header and will mate with the FMF slip on you have.
The Hot Rods bottom kit is excellent and contains the main bearings and all the seals and gaskets you need to do the install.
The Wiseco is a good piston and the increased compression will increase power everywhere.
The SS valves will increase the valve durability over the stock valves. I recommend the Kibblewhite brand. Also, you must have the valve seats professionally cut to maximize performance and valve durability. We offer these services as well as performance porting.
You should consider upgrading to a 2007 CRF450R head. This has superior porting and is a better place to start when porting. The reason is Honda increased velocity flow by decreasing port volume. So, increasing port volume of a 2005 head, while improving performance of the 2005 head, won't approach the performance of the 2007 head. If you can only afford one or the other, get the 2007 head. We offer the '07 head with KW stainless valves installed with our performance CNC valve seat blending and port bowl work. Much of the performance gained from a port job is above the valve guide in the port bowl and valve seat.
On the cam, I would need to know more about what type of riding and skill you have to make a recommendation.
Stock clutch will be fine if it's within spec.
I do recommend replacing the cam chain if it has a lot of hours. Like any chain they wear and stretch. since the cam chain is what keeps everything from colliding it's cheap insurance.
The manual cam chain tensioner we offer is recommended for all motors. Again, cheap insurance.
While you are doing this motor work, consider updating teh carb with the updated AP kit and replacing the floating valve seal on the slide. We have how-to articles for both:
http://crfsonly.com/howto/keihin-fcr-ca ... rf450r.php
http://crfsonly.com/howto/keihin-fcr-ca ... rf450r.php
Also, replace the plastic hot start nut with the Pro Circuit/Zip Ty we stock. It's not necessary but makes servicing the carb much easier and prevents a damaged hot start from causing ride time issues.
http://crfsonly.com/howto/keihin-fcr-ca ... rt-nut.php
Ken