First - welcome to the site. They guys here are great.I'm sorry if I posted this in the wrong place, I'm new to the forum.
I recently bought an ’06 CRF450X and have a substantial engine vibration at cruising speed and above. It’s enough to make my hands, feet and other parts numb after about 15 minutes. The bike starts easily, runs strong and compression is good. I’ve torqued the engine mounting and exhaust bolts and found no change. I’ve read about the counter balancer shaft and bearings causing a vibration. The top end doesn’t appear to have ever been off. I can see the stator cover has been off and I’m wondering:
A. Can the balancer gear be installed on the shaft in only one position or is it possible to install it incorrectly?
B. Has anyone here solved a major vibration by replacing the counter balancer shaft and bearings?
Thanks for any other thoughts.
Second - I think the preferred method for this would be for you to start a new topic (but no worries - if it's a big deal someone that knows more than me will probably move it)
Third - and to your question. You say "at cruising speed". How fast are you going, and what surface are you riding on (dirt/sand, pavement, hard pack, rock, ...?)
Fourth - does the vibration occur at a certain RPM, or is it based on speed? Stated a little differently if you sit on the bike in neutral and slowly increase the RPMs by giving it throttle can you replicate the vibration without moving?
If you cannot replicate the vibration in neutral then it is (most likely) related to the post trans drive components. (FWIW my first thought when I read your question was if you were riding knobby tires on pavement)
If it can be replicated in neutral then it is (most likely) motor/trans.
I'm oversimplifying this a little bit, but I think folks here will be able to help if you can try to isolate the source a little. (so don't flame me guys)